INDEX
Every paper Pith has read and judged, in one searchable index.
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physics.bio-ph arXiv submitted 2026-07-14Trees buffer trunk heat toward deep soil
Jean-Baptiste Boul\'e +6 · “On seasonal trunk thermal buffering and its electrical signature in mature trees”
2607.12760 -
physics.flu-dyn arXiv submitted 2026-07-14Soft cilia bistable
Hang Su +2 · “Emergent coordination and propulsion of a model spherical ciliate”
2607.12436 -
physics.bio-ph arXiv submitted 2026-07-13Brain signaling recast as multiscale wave mechanics
Samina S. Masood +2 · “Multiscale Biophysical Waves (MBW): Conceptual and Theoretical Framework”
2607.11745 -
physics.bio-ph arXiv submitted 2026-07-13Brain waves convert to longitudinal modes at tissue interfaces
Samina S. Masood +2 · “Multiscale Biophysical Waves (MBW): Conceptual and Theoretical Framework”
2607.11745 -
physics.bio-ph arXiv submitted 2026-07-13Radical-pair dipole model reproduces 24-degree bird disorientation
Ali Soltanmanesh +4 · “Influence of Oscillating Magnetic Fields on the Electric Dipole Moment of Radical Pairs in Cryptochrome Based Magnetoreception”
2607.20546 -
cond-mat.soft arXiv submitted 2026-07-13Coloured noise traps tubulin excitons on proximal tryptophan pairs
Chen Xin · “Molecular Dynamics-Derived Coloured Noise Mediates Anderson Localisation and Environment-Assisted Transport of Tryptophan Excitons in Tubulin”
2607.11135 -
cond-mat.soft arXiv submitted 2026-07-13Coloured noise localises tubulin excitons to proximal pairs
Chen Xin · “Molecular Dynamics-Derived Coloured Noise Mediates Anderson Localisation and Environment-Assisted Transport of Tryptophan Excitons in Tubulin”
2607.11135 -
cond-mat.soft arXiv submitted 2026-07-13Coloured noise, not white, shapes tubulin exciton transport
Chen Xin · “Molecular Dynamics-Derived Coloured Noise Mediates Anderson Localisation and Environment-Assisted Transport of Tryptophan Excitons in Tubulin”
2607.11135 -
physics.med-ph arXiv submitted 2026-07-13AQP4 loss cuts modeled glymphatic outflow by 40 percent
Tanran Zhang +1 · “PVS-Facing AQP4 Transport and Dynamic Inter-Endfoot Gaps Regulate Gap-Dominated Glymphatic Clearance: Implications for Aging”
2607.20544 -
physics.bio-ph arXiv submitted 2026-07-12Bacteria and soil reshape each other at every scale
Pablo Bravo +4 · “Life in a tight spot: Coupled dynamics of bacteria and soil across scales”
2607.10734 -
nlin.AO arXiv submitted 2026-07-12Closed slow-fast loop heals swarm connectedness after breaks
Jyotiranjan Beuria · “Self-Healing Coordination in Cognitive Swarm Agents with Bloch-Type Perceptual Memory”
2607.11960 -
cond-mat.soft arXiv submitted 2026-07-12Enzymes push micron beads: strongest when stuck on the surface
Mauricio Gomez +7 · “Enhanced diffusion of colloidal tracers due to enzymatic activity”
2607.10646 -
physics.comp-ph arXiv submitted 2026-07-11Exponential integrators free stochastic reaction-diffusion sims from tiny steps
Elliot J. Carr · “Stochastic simulations of nonlinear reaction-diffusion equations using an exponential integrator”
2607.10065 -
physics.bio-ph arXiv submitted 2026-07-10Three noisy neurons mirror a quantum error-correcting code
Ian Whitehouse +7 · “Quantum error correction and biological error correction: A structural analogy between qubits and neurons”
2607.20534 -
physics.bio-ph arXiv submitted 2026-07-09Sled dogs switch galloping stride patterns every few steps
Benjamin Seleb +1 · “Acceleration-based clustering reveals frequent gait switching in sprint sled dogs”
2607.08644 -
physics.optics arXiv submitted 2026-07-09Cell temperature maps fail without matched calibration
Araceli de Aquino Samper +3 · “Intracellular luminescence thermometry: A story of disagreement, trust, and hope”
2607.08574 -
physics.bio-ph arXiv submitted 2026-07-09Open brain-folding model matches primary sulci to 28 weeks
Anne Kerachni +5 · “Open-source MRI-informed computational model of human cortical folding”
2607.08534 -
physics.chem-ph arXiv submitted 2026-07-08Flavin vibrations survive electron hop and report the radical anion
Krishan Kumar +10 · “Coherent vibrational wave packet motion in ErCry4a proteins monitors the redox state of the flavin chromophore”
2607.07945 -
cond-mat.soft arXiv submitted 2026-07-08Hot defects crystallize quorum-sensing clusters
Feifei Liu +3 · “Understanding quorum sensing self-organization: Clustering and defect-induced ordering of diffusing particles”
2607.07906 -
physics.bio-ph arXiv submitted 2026-07-08Four routes turn equal cell circling into one-sided chirality
Andreas Buttensch\"on +1 · “Directional bias of a single polarized cell under confinement”
2607.07578 -
physics.bio-ph arXiv submitted 2026-07-08Flanking DNA steepens force-driven looping
Wout Laeremans +2 · “DNA handles bias force-dependent looping times”
2607.07561 -
physics.bio-ph arXiv submitted 2026-07-08One equation predicts silk stiffness from its molecular structure
Eli Yovel +1 · “Stiffness by design in biological fibers: the influence of microstructure and temperature”
2607.07377 -
q-bio.BM arXiv submitted 2026-07-08Sampling beats force fields for RNA magnesium binding
Olivier Languin-Catto\"en +2 · “Enhanced sampling and cryo-EM data resolve magnesium binding to RNA”
2607.07186 -
physics.bio-ph arXiv submitted 2026-07-08Curved surfaces spontaneously pattern cell size
Yuan He +1 · “Spontaneous patterning of cell size on curved surfaces”
2607.07102 -
nlin.CG arXiv submitted 2026-07-08Dimension reshapes tissue mechanics into different diffusion laws
Matthew J Simpson +1 · “Dimension-dependent continuum limits in tissue mechanics”
2607.07000 -
physics.bio-ph arXiv submitted 2026-07-08Dissipation bounds how far biochemical waves wander
Shengyao Luo +2 · “Thermodynamic Limits on Reliable Signaling by Biochemical Traveling Waves”
2607.06997 -
cond-mat.soft arXiv submitted 2026-07-07Protein coat's apparent stiffness grows with lattice size
Samuel L. Foley +1 · “Hybrid Dynamical Simulation Reveals Apparent Stiffening of Flexible Protein Lattices Driving Membrane Bending”
2607.06378 -
cond-mat.soft arXiv submitted 2026-07-07Protein lattice stiffness depends on how you measure it
Samuel L. Foley +1 · “Hybrid Dynamical Simulation Reveals Apparent Stiffening of Flexible Protein Lattices Driving Membrane Bending”
2607.06378 -
physics.optics arXiv submitted 2026-07-071 mm mid-infrared chemical imaging via high-energy OPO
Anooj Thayyil Raveendran +4 · “Millimeter-scale wide-field mid-infrared photothermal imaging enabled by a broadly tunable picosecond optical parametric oscillator”
2607.06208 -
physics.bio-ph arXiv submitted 2026-07-07Ray fins stiffen to swim faster
Jun Chen +2 · “Dynamics modeling and analysis of batoid-type locomotion powered by tensegrity wing structure”
2607.20514 -
cond-mat.soft arXiv submitted 2026-07-07Noise islands restructure flocks into locked and vortex states
Ankush Semwal +2 · “Spatially heterogeneous noise restructures flocking into geometry-locked and vortex states”
2607.05870 -
physics.bio-ph arXiv submitted 2026-07-07Weak magnetic fields boost tadpole eye pigment cell numbers
Hadi Zadeh-Haghighi +3 · “Magnetosensitivity of amphibian morphological pigmentation is light- and eye-dependent and consistent with the radical pair mechanism”
2607.20513 -
physics.flu-dyn arXiv submitted 2026-07-07Both fluidity and fiber elasticity close large cell-sheet wounds
Chaozhen Wei +7 · “Continuum modeling of fluidic and elastic flow during growth-driven wound closure in partial-EMT cell monolayers”
2607.05820 -
cond-mat.stat-mech arXiv submitted 2026-07-06Last boundary hit, not barrier top, defines reactant states
Alexander M. Berezhkovskii +2 · “Modern view of activated rate processes: unidirectional fluxes at equilibrium, correlation functions, and splitting probabilities”
2607.05672 -
physics.bio-ph arXiv submitted 2026-07-06Polymer placement can reverse drug-release time under blinking
Daniel M. Anderson +1 · “Drug release dynamics from a three-layer composite contact lens in the vial, eye wear with blinking, and blister pack settings”
2607.05633 -
physics.bio-ph arXiv submitted 2026-07-06Snakes climb walls by reshuffling extra footholds
Calvin A. Riiska +5 · “Redundant contacts and force redistribution stabilize limbless vertical climbing”
2607.06239 -
physics.bio-ph arXiv submitted 2026-07-06Probability ratios lock to equilibrium under any drive
U\u{g}ur \c{C}etiner · “Energetic Protection, Monotonicity and Switching Far from Equilibrium”
2607.05303 -
cond-mat.soft arXiv submitted 2026-07-06Faster bacteria join longer chains
Guillaume Sint\`es +4 · “Swimming-limited aggregation of bacteria in liquid crystals”
2607.05239 -
cond-mat.stat-mech arXiv submitted 2026-07-06Injected power goes universal in a flickering trap
Derek Frydel · “Semi-Markovian switching in a fluctuating harmonic trap: An age-structured formulation”
2607.05173 -
physics.bio-ph arXiv submitted 2026-07-06Living catalytic droplets reduce to a few effective fluxes
Charley Schaefer +1 · “Biophysics of the Pyrenoid”
2607.05154 -
physics.bio-ph arXiv submitted 2026-07-06HIV rebound is a threshold crossing
Mesfin Asfaw Taye · “Stochastic First-Passage Theory of HIV Viral Rebound Following Latent Reservoir Reactivation”
2607.04910 -
physics.bio-ph arXiv submitted 2026-07-06HIV rebound is a delayed first crossing
Mesfin Asfaw Taye · “Stochastic First-Passage Theory of HIV Viral Rebound Following Latent Reservoir Reactivation”
2607.04910 -
physics.bio-ph arXiv submitted 2026-07-06Aging runs on proper time, not calendar years
Mesfin Asfaw Taye · “Relativistic PBTE:Biological Proper Time Along the Worldline”
2607.04849 -
physics.chem-ph arXiv submitted 2026-07-06Crystal seeds pick A+T out of a three-base mix
Yael Kapon +2 · “Combinatorial Compression in Nucleobase Self-Assembly Governed by Seeding Kinetics”
2607.04841 -
physics.bio-ph arXiv submitted 2026-07-06Life spends a finite internal-time budget
Mesfin Asfaw Taye · “Biological Time, Evolutionary Optimization, and Gauge Coherence: A Thermodynamic Synthesis of the Principle of Biological Time Equivalence”
2607.04827 -
physics.chem-ph arXiv submitted 2026-07-05Constants fix chemical and folding speed limits
Dmitrii E Makarov · “Speed limits on biomolecular processes from fundamental physical constants”
2607.04549 -
q-bio.PE arXiv submitted 2026-07-05Loser species survives by switching environments fast enough
Riz Fernando Noronha +1 · “A loser in both environments can survive by switching between them”
2607.04204 -
physics.bio-ph arXiv submitted 2026-07-04H2O2 alone sends diatom biofilms diving into sediment
Alexandre Desparmet +4 · “Reactive oxygen species trigger downward vertical migration in diatom microphytobenthic biofilms as a strategy to cope with oxidative stress”
2607.03958 -
physics.bio-ph arXiv submitted 2026-07-04Nerve impulses pair up as supersymmetric Lambert W kinks
M. F. De la Rosa-L\'opez +4 · “Supersymmetric pairing of Lambert W-kink nerve impulses”
2607.20509 -
physics.bio-ph arXiv submitted 2026-07-03Coherent protein vibrations make long-range attraction measurable
Matteo Gori +3 · “Hamiltonian Dynamics and Fundamental Phenomena in Biophysics: A Review”
2607.20508