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Every paper Pith has read. Search by title, abstract, or pith.
301 papers in physics.bio-ph · page 4
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Many quantum states can map to one agent choice
Agent Choice via Quantum Flux in Living Systems
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Slovakia mass testing linked to higher mortality not lower cases
Slovakia's Mass Testing: A Critical Look at the Negative Effects
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Hematocrit dictates where platelets gather on wavy vessel walls
Haematocrit and Shear Rate Modulate Local Cell-free Layer Thickness and Platelet Margination in Blood Flow Along a Sinusoidal Wall
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Phenomenological inductance aids axon action potential models
On phenomenology of physical effects in axons
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Shot noise limits single ion channel voltage accuracy to 10 mV
Thermal fluctuations set fundamental limits on ion channel function
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Measles vaccine virus softens Vero cells by 35% in 24 hours
Mechanical Softening of Vero Cells Induced by an Attenuated Measles Vaccine Virus
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Occasional resets reproduce microtubule catastrophe length distributions
Resetting dynamics in a system with quenched disorder
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Four detectors track nanodiamonds ten times faster
Nanodiamond sensing in dynamic environments with fast-tracking through four-point positioning
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Quantum circuit learns cell communication as state shift
QuantumXCT: Learning Interaction-Induced State Transformation in Cell-Cell Communication via Quantum Entanglement and Generative Modeling
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Surface waves measure rotational friction of bound proteins
Rotational Fluorescence Recovery after Orientational Photobleaching via surface electromagnetic waves on dielectric stacks
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Error correction keeps brain signals coherent for 200 milliseconds
Covariant quantum error correction in a three-layer quantum brain model: computational analysis of layer-specific coherence dynamics
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Model derives tissue EM absorption from Maxwell equations
An Analytical Framework for Frequency-Dependent Electromagnetic Power Absorption in Biological Tissues
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Raman photothermal scattering images single proteins label-free
Label-free Imaging of Single-Biomolecule Structure and Interaction by Stimulated Raman Photothermal Encoded Scattering
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EEG amplitudes follow horizon-set renormalization scaling
Black Hole-Inspired Horizon Model for Neural Signal Dynamics
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Curvature sorts lipids and cracks bolalipid membranes
Cracking donuts and sorting lipids: Geometry controls archaeal membrane stability and lipid organization
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Keldysh formalism gives exact entropy production rate for living systems
Non-Markovian Entropy Dynamics in Living Systems from the Keldysh Formalism
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Long-time cell motion in tissues follows persistent Brownian dynamics
Universal Persistent Brownian Motions in Confluent Tissues
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Helix-coil transitions in proteins measure 0.145 residues wide
Sub-residue sharpness of protein helix-coil transitions reveals a spatial-spectral uncertainty limit
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Wild-type CV predicts mutation effects on unfolding rates
Guiding Peptide Kinetics via Collective-Variable Tuning of Free-Energy Barriers
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Motor coupling lengthens flagellar beats and creates bi-stability
How Molecular Motors' Interaction Shapes Flagellar Beat and Its Fluctuations
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Pumps self-align to create sustained membrane voltage
Self-Organized Bioelectricity via Collective Pump Alignment: Toward a Physical Origin of Chemiosmosis
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Biomembrane shapes form intrinsic geometric group
Liquid Crystal Theory of Biomembranes
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Growth keeps microbial droplets round on viscous fluids
Instability of microbial droplets growing on viscous substrates
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Model achieves quantum accuracy on 1500-atom biomolecules
UBio-MolFM: A Universal Molecular Foundation Model for Bio-Systems
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Balanced metabolite levels raise metabolic control but also heat loss
Thermodynamic cost-controllability tradeoff in metabolic currency coupling
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Two networks explain spider silk yield and recovery
Plasticity, hysteresis, and recovery mechanisms in spider silk fibers
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Plankton catch prey using stereo flow sensors plus rolls
Steer'n Roll: A Stereoscopic Flow-Sensing Strategy for Planktonic Prey Detection and Capture
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Velocity sets muscle efficiency peak more than stimulation frequency
Effects of stimulation frequencies on energy efficiency of a muscle fiber during contraction
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Machine-learned force fields match DFT accuracy for biomolecular vibrations
Quantum-Accurate Conformational Stabilities and Vibrational Dynamics in Molecules and Proteins with Machine-Learned Force Fields
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HGO and polynomial models fit tendon strains where neo-Hookean fails
Constitutive parameter inference using physics-based data-driven modeling in full volume datasets of intact and torn rotator cuff tendons
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Analytical formulas give zero-current voltage in charged nanochannels
The transmembrane potential across a charged nanochannel subjected to asymmetric electrolytes
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Assembly theory measures causation to define life
The Physics of Causation
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Entropy production equals four times mutual info rate plus flow
Exact Identity Linking Entropy Production and Mutual Information
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Epigenetic feedback reshapes the Waddington landscape
Epigenetic feedback reshapes dynamical landscapes in gene regulatory networks
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Myofibroblasts anchor at -1/2 defects and slow recombination
Myofibroblasts slow down defect recombination dynamics in mixed cell monolayers
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Dual-mode sensor quantifies three cardiac biomarkers in 23 minutes
Deep learning-enhanced dual-mode multiplexed optical sensor for point-of-care diagnostics of cardiovascular diseases
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Physics model turns DMS data into RNA ensemble predictions
MERGE-RNA: a physics-based model to predict RNA secondary structure ensembles with chemical probing
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Polar-apolar mixtures enter chaotic phase with proliferating defects
Spatiotemporal Chaos and Defect Proliferation in Polar-Apolar Active Mixture
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Hodgkin-Huxley model fits plant APs in changing light conditions
Modeling Plant Action Potentials under Photoperiod Stress via Hodgkin-Huxley Dynamics
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Coherence dispersion peaks at intermediate entropy
Quantum Coherence Dispersion
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Motor count fluctuations explain cilium beat variability
Motor shot noise explains active fluctuations in a single cilium
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Far-field flows let active dipoles follow Hamiltonian rules in membranes
Hamiltonian Active Particles in Incompressible Fluid Membranes
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Analytic solution links retinal capillaries to tissue and vessels
A novel multiscale modelling for the hemodynamics in retinal microcirculation with an analytic solution for the capillary-tissue coupled system
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Immune capacity arises as a conserved quantity from antigenic symmetry
Invariance under Structure Translation as the Origin of Host Immune Capacity Conservation from Noether's Theorem
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Local monomer depletion enables actin network coexistence
A theory for coexistence and selection of branched actin networks in a shared and finite pool of monomers
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Controller steers +1 defects along chosen paths in active fluid
Spatiotemporal Control of Charge +1 Topological Defects in Polar Active Matter
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Vapor from sweat slows its own evaporation in still hot air
Perspiration vapor lightens near skin air but hinders human evaporative cooling in arid heat
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Layer-specific conductivity refines brain stimulation models
Mesoscale tissue properties and electric fields in brain stimulation: Bridging the macroscopic and microscopic scales using layer-specific cortical conductivity
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Contact clusters model allostery in PDZ domains
Contact cluster modeling of allosteric communication in PDZ domains
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Protein distributions solved exactly in burst-approximated gene models
Asymptotics of Protein Number Distribution in Stochastic Gene Expression Models under Burst Approximation