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Every paper Pith has read. Search by title, abstract, or pith.
301 papers in physics.bio-ph · page 1
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Lorentzian family is unique invariant under Riccati transport
Geometric Origin of Exact Mean-Field Reductions: M{\"o}bius Symmetry and the Lorentzian Ansatz
6 Piths -
Hyperedge approximation yields thresholds for group cooperation and contagion
Hyperedge approximation for stochastic processes on higher-order networks
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Long nanotubes escape traps by lining up with exits
Orientational frustration drives enhanced diffusion of anisotropic particles in a liquid labyrinth
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CISS boosts radical pair sensitivity only with non-collinear axes
Conditional Enhancement of Radical Pair Dynamics via Chiral State Preparation
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Ion pumping at interfaces generates long-range electric fields and flows
Electrohydraulic Fields Generated by Active Transport at Tissue Interfaces
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Cilia produce linear flow-pressure trade-off in ducts
Cilia-driven transport in confined ducts: an active porous media model
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Learned policy outperforms cast-and-surge in turbulent odor search
Smart strategies to navigate turbulent odor plumes reorienting to local wind
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SERS nanopore plus CNN reads proline hydroxylation in single peptides
Label-free SERS Discrimination of Native Proline Hydroxylation at Single-molecule peptide by Deep Learning-assisted plasmonic nanopore
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Blueprint couples materials and biomedical data into governed AI workflows
AIMBio-Mat: An AI-Native FAIR Platform for Closed-Loop Materials Discovery and Biomedical Translation
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Confinement induces bistable tangential orientations in active particles
Origin of Persistent Boundary Motion in Confined Active Matter
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Contractile pre-strains close large jellyfish wounds mechanically
Effective strains enable rapid wound closure in jellyfish after injury
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Xenon spin alters anesthesia through chiral permeability
Xenon Anesthesia and Nuclear Spin Effects in Chiral Systems
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Optimized double nanoholes triple field boost in optical tweezers
Morphology-Driven optimization of Double Nanohole-based Plasmonic Optical Tweezers
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Polymerization alone unifies all amoeboid migration modes
Amoeboid cell migration and shape dynamics driven by actin polymerization
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Communities exhibit skewed weak and Pareto strong interactions
Skewed weak and Pareto-tailed strong interactions accompany community diversity and complexity
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Crystalline codes give 100x hippocampal memory capacity
Geometric Phase Transition Enables Extreme Hippocampal Memory Capacity
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Stochastic timing boosts growth in first-passage branching
Branching under First-Passage Resetting
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Simple feedback law optimizes albatross soaring in real time
Universal Extremum Seeking Mechanism for Lift Variation in Soaring Birds Flight: A New Paradigm in Computational Physics and Biology
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Simulations tie ADC conjugation choices to function
Biophysical Considerations for Rational Antibody and ADC Design
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NDC turns thermodynamic networks into universal function approximators
Thermodynamic Networks: Harnessing Non-Equilibrium Steady States for Computation
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Clock since last whiff teaches Q-agent to surge
Clock-state olfactory search in turbulent flows using Q-learning: The geometry of plume recovery
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Actin cross-linking confines basal bodies for uniform cilia pattern
Actin cross-linking organizes basal body patterning through anomalous diffusion transitions
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Limit cycles sweep through rare Turing pattern regimes
How nature discovers rare Turing islands: exploration by common limit cycles
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Actin rate rise triggers flocking transition in cell model
Multiscale order, flocking and phenotypic hysteresis in the cellular Potts model of epithelia
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Lanternfly nymphs use capillary rectifier
A developmental switch from capillary rectification to elastic catapult enables honeydew ejection in the spotted lanternfly
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Chromatin fibers steer phase-separated droplets via wetting
A Brownian dynamics study of liquid-liquid phase separation in multi-scale chromatin networks
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Nutrient depletion separates sibling bacterial colonies
Kin-ematic Exclusion in Active Matter: Modelling Mutual Inhibition in \textit{Pseudomonas aeruginosa} Sibling Colonies
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Onsager principle yields unified diffuse-domain models for interfaces
Onsager-variational formulation of diffuse-domain methods for computational modeling of microscale fluid-structure interactions
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3D model checks if cell division rules build plant symmetry
3D mechano-geometric multicellular model of apical stem cell-driven plant morphogenesis
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Time discard rule orders population behavior for free
Conditioning as a route to stereotyped behavior in growing populations
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Beverage waste drives top mycoprotein growth rates
Kinetics of Mycoprotein Production from Alternative Carbon Substrates
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Cell divisions suppress avalanches in tissue rearrangements
Cell divisions suppress dynamical correlations in solid tissues
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SLM phase masks emulate real scattering
Towards digital phantoms: emulating scattering with a spatial light modulator
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Acoustic force quantifies single-condensate viscoelasticity
Tracer-free Contactless Acoustic Microrheometry Quantifies Viscoelastic Spectrum of Phase-separated Condensates
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Urea swaps water in BSA shell then lets it return
Molecular Mechanisms of Urea Interactions with Bovine Serum Albumin in an Acid-Expanded Conformation (pH 3.7)
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Persistence speeds one bacterial invasion wave but not the reverse
Travelling waves of invasion in microbial communities with phenotypic switching
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Mobile nuclei shuttle signals like pigeon post in slime mold
Coexistence of trapped and flow-transported nuclei enables fast pigeon post communication across multinucleated cell
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Theory optimizes molecular machine designs via flow networks
Nonequilibrium Theory for Molecular Machine Design
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BP180 homotrimer model stays folded in simulations
A putative, computationally stable structure of homotrimeric BP180/collagen XVII
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Insertion depth drives concentration-dependent bilayer destabilization
Concentration-Dependent Membrane Destabilization in DPPC Bilayers: Distinct Insertion Mechanisms and Stress Redistribution by Chloroform and Alkanols
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Acidic byproducts from sugars limit S
Growth Dynamics of S. aureus with Sugars and Sugar Alcohols in Weak Magnetic Fields
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CISS suppresses triplet formation in heliobacterial photosynthesis
Chiral-Induced Spin Selectivity Regulates Triplet formation in Heliobacterial Photosynthesis
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Cells crawl best at intermediate substrate stiffness
Cellular-scale mechanism of cell crawling responding to substrate stiffness
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Functionalized microelectrodes sense lactate at 10 nM
Indirect Detection of Lactate Through Voltammetry Using Glassy Carbon Microelectrodes
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Extrinsic noise required to explain E
Essential Role of Extrinsic Noise in Models of E. coli Division Control
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Axon models recover polarization fidelity to 0.8 with combined imperfections
Modeling Optical Polarization Evolution in Myelinated Axon Waveguides with Realistic Imperfections
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Climate anomalies synchronize dengue outbreaks across Brazilian cities
Climate and dengue synchronization in southern Brazil: a municipal analysis with cross-state validation
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Subdiffusion arises from projecting structured particle dynamics
Anomalous Diffusion as Structural Memory: An Extended Structural Dynamics Approach
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Condensin reverses DNA loops via catch-bond intermediate
Loop Extrusion Reversal by Condensin Motor is Mediated by Catch Bonds
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Delay alone creates chimera states then waves in neuron networks
Delay-induced chimera transitions via mode selection in a multiplex FitzHugh Nagumo network