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INDEX

Every paper Pith has read and judged, in one searchable index.

1,290 reviewed papers in physics.bio-ph · newest first · page 6

Pith rank means recent reader upvotes with each upvote's ranking weight halved after 24 hours. The archive itself is sorted by arXiv submission date.

  1. physics.bio-ph arXiv submitted 2026-06-02
    Traction bistability arises from cell-ECM feedback on stiffening substrates

    Irina Pi-Jaum\`a +2 · “Bistability of cellular traction on strain-stiffening substrates”

    2606.03669
  2. cond-mat.soft arXiv submitted 2026-06-02
    Ramp-relaxation tests measure fascia lata mechanics in living subjects

    Franck Germain +1 · “In vivo measurements of fascia lata effective mechanics combined to a memory fiber recruitment viscoelastic modeling approach”

    2606.03353
  3. cond-mat.stat-mech arXiv submitted 2026-06-02
    Geometry sets finite-time efficiency bounds for active machines

    Geng Li +1 · “Geometric Bounds on the Finite-Time Performance of Active Machines”

    2606.03205
  4. physics.bio-ph arXiv submitted 2026-06-01
    Lagrangian in DNA space yields collective coordinate for organism coherence

    Yehuda Roth · “Classical Coherence Distinguishes Organisms from Colonies”

    2606.02801
  5. cond-mat.dis-nn arXiv submitted 2026-06-01
    Repulsive oscillators on kagome lattice relax to metastable states

    Brandon B. Le · “Frustrated neurons: Energy landscapes and relaxation dynamics in repulsive phase oscillators”

    2606.02512
  6. physics.bio-ph arXiv submitted 2026-06-01
    Chromatin co-condensation enables BRD4 assembly below bulk threshold

    Yury Polyachenko +3 · “Co-condensation and multivalency enable acetylation-sensitive, concentration-robust assembly of BRD4 condensates”

    2606.02275
  7. quant-ph arXiv submitted 2026-06-01
    Penalty-free QAOA solves lattice protein folding to length 14

    Leif Gellersen +3 · “Penalty-free quantum optimization applied to lattice protein folding”

    2606.02104
  8. cs.AI arXiv submitted 2026-06-01
    Image topology detects sol-gel point in casein

    Zahra Tabatabaei +4 · “Topological texture analysis of microscopy images of dynamic casein gelation and its relation to rheological properties”

    2606.02048
  9. cond-mat.soft arXiv submitted 2026-06-01
    Tension feedback on severing shifts network rigidity threshold

    Prathamesh Kulkarni +2 · “Stress relaxation in fiber networks via force-dependent stochastic severing”

    2606.01752
  10. physics.bio-ph arXiv submitted 2026-05-30
    Cilia position shift boosts flow via elastic coupling

    Shota Nakano +2 · “Elastohydrodynamic coupling enhances flow generation by coordinated ciliary beating”

    2606.00595
  11. cond-mat.dis-nn arXiv submitted 2026-05-29
    Particles accumulate at convergent filament orientations

    Owen Santoso +1 · “Localization of Active Particles on Random Arrays of Parallel Filaments”

    2606.00286
  12. cond-mat.soft arXiv submitted 2026-05-29
    Oxygen turns Euglena clouds into rotating coronas

    Azam Gholami +4 · “Spontaneous flows and interfacial instabilities in oxygen-sensitive living active matter”

    2605.31355
  13. cond-mat.soft arXiv submitted 2026-05-29
    Oxygen gradients form rotating coronas in Euglena suspensions

    Azam Gholami +4 · “Spontaneous flows and interfacial instabilities in oxygen-sensitive living active matter”

    2605.31355
  14. physics.bio-ph arXiv submitted 2026-05-29
    Inertia makes forward and backward optimal paths distinct

    Tianyu Luo +1 · “Optimal transition in underdamped systems with memory”

    2605.30897
  15. physics.bio-ph arXiv submitted 2026-05-28
    Symmetry inverts bright-dark ordering in LH2 crystal

    Javed Akhtar +1 · “Collective Emission in LH2 Assembly Beyond the Point-Dipole Approximation”

    2606.11227
  16. cond-mat.soft arXiv submitted 2026-05-28
    Pipeline of sims, experiments and ML maps DNA fluid rheology

    Md Mozakker H. Shojib +5 · “Synergistic approach to probing the dynamics and mechanics of patchy soft matter”

    2605.29967
  17. physics.flu-dyn arXiv submitted 2026-05-28
    Bacterial depletion and alignment stem from one phase-space topology

    Mingyang Guan +4 · “Active phase-space topology unifies depletion and alignment in bacterial flows”

    2605.29333
  18. physics.bio-ph arXiv submitted 2026-05-27
    Sperm head steers direction over tail wave at fluid boundaries

    Robert L. Scott +6 · “Effective roles of the head and flagellum in sperm motility”

    2605.29050
  19. physics.bio-ph arXiv submitted 2026-05-27
    Sperm head steers

    Robert L. Scott +6 · “Effective roles of the head and flagellum in sperm motility”

    2605.29050
  20. physics.bio-ph arXiv submitted 2026-05-27
    One watt per kilogram sets the negentropy scale in living systems

    F. Ritort · “Heatomics”

    2605.28720
  21. cond-mat.soft arXiv submitted 2026-05-27
    Biomolecular phase separation thresholds track excess chemical potential

    Huan-Xiang Zhou · “Determinants of Phase-Separation Propensities, Material States, and Material Properties of Biomolecular Condensates”

    2605.28651
  22. physics.bio-ph arXiv submitted 2026-05-27
    Clots reach finite size set by fluid drag alone

    Alper Topuz +2 · “Primary hemostasis and dynamics of clot formation after microvascular injury”

    2605.28096
  23. physics.bio-ph arXiv submitted 2026-05-27
    Virological data are protocol kernels

    Lillian St. Kleess · “Experimental Collapse in Virophysics: Protocol-Resolved Observation, Inference, and Plaque-Assay Blindness”

    2605.27928
  24. physics.bio-ph arXiv submitted 2026-05-26
    Fibonacci index matches WBE equation for body-mass growth in two of four species

    Dorilson Silva Cambui · “A Fibonacci-Based Ontogenetic Discretization of Body-Mass Growth Trajectories”

    2605.27208
  25. physics.bio-ph arXiv submitted 2026-05-26
    Meditation reduces intermittency in palm biophoton emissions

    E. Pace +7 · “Biophoton Emission from Palm during Meditation: A Multi-Method Complexity Analysis”

    2605.26758
  26. cond-mat.mtrl-sci arXiv submitted 2026-05-26
    Coated nanoparticles turn NIR light into singlet oxygen against MRSA

    Pratik Deshmukh +5 · “Near-Infrared-Triggered Photodynamic Antibacterial Therapy Using Rose Bengal-Coated Upconverting Nanoparticles”

    2605.26557
  27. q-bio.NC arXiv submitted 2026-05-26
    Random neural networks incorporating finite measurement time and behavioral context…

    Zehui Zhao +2 · “Random neural networks match observed dimensionality of neural population recordings and motivate stronger experimental tests”

    2605.26551
  28. cond-mat.soft arXiv submitted 2026-05-25
    Gaussian recovery in polymers comes from masking

    Jos\'e A. Martins · “Beyond Gaussian Statistics in Polymer Melts: Statistical Masking of Persistent Local Constraints”

    2605.25989
  29. physics.bio-ph arXiv submitted 2026-05-25
    Choanoflagellate collars cluster along hydrodynamics ridges

    Tasawar Iqbal +3 · “Hydrodynamics constrain choanoflagellate collar geometry”

    2605.25337
  30. physics.flu-dyn arXiv submitted 2026-05-24
    Active turbulence LCS show time symmetry

    Suvarchalanjan Bellaganti +3 · “Time-Symmetry of Lagrangian Coherent Structures in Active Turbulence”

    2605.25056
  31. physics.bio-ph arXiv submitted 2026-05-24
    DNA breaks trigger protein condensation to tether ends

    Rakesh Das +4 · “DNA end tethering through break-induced DNA--protein condensation”

    2605.24987
  32. physics.bio-ph arXiv submitted 2026-05-24
    Enthesis strain drops from 20% tissue level to 0.05% in crystals

    Isabella Silva Barreto +10 · “Structural gradients and strain partitioning across the mouse Achilles tendon enthesis revealed by in situ X-ray scattering”

    2606.06504
  33. cond-mat.soft arXiv submitted 2026-05-22
    Three resonances appear in overdamped odd solids

    Julius Kiln +1 · “Resonances in Overdamped Odd Materials”

    2605.24276
  34. physics.bio-ph arXiv submitted 2026-05-22
    Lorentzian family is unique invariant under Riccati transport

    Hugues Berry (AISTROSIGHT) +1 · “Geometric Origin of Exact Mean-Field Reductions: M{\"o}bius Symmetry and the Lorentzian Ansatz”

    2605.23669
  35. physics.soc-ph arXiv submitted 2026-05-22
    Hyperedge approximation yields thresholds for group cooperation and contagion

    Anzhi Sheng +5 · “Hyperedge approximation for stochastic processes on higher-order networks”

    2605.23444
  36. cond-mat.soft arXiv submitted 2026-05-22
    Long nanotubes escape traps by lining up with exits

    Rohit Mangalwedhekar +7 · “Orientational frustration drives enhanced diffusion of anisotropic particles in a liquid labyrinth”

    2605.23340
  37. physics.bio-ph arXiv submitted 2026-05-21
    CISS boosts radical pair sensitivity only with non-collinear axes

    Tristen Gwynn +2 · “Conditional Enhancement of Radical Pair Dynamics via Chiral State Preparation”

    2605.22130
  38. physics.bio-ph arXiv submitted 2026-05-21
    CISS boosts radical-pair sensing only when axes misalign

    Tristen Gwynn +2 · “Conditional Enhancement of Radical Pair Dynamics via Chiral State Preparation”

    2605.22130
  39. cond-mat.soft arXiv submitted 2026-05-21
    Ion pumping at interfaces generates long-range electric fields and flows

    Amit Singh Vishen +2 · “Electrohydraulic Fields Generated by Active Transport at Tissue Interfaces”

    2605.22056
  40. physics.flu-dyn arXiv submitted 2026-05-20
    Cilia produce linear flow-pressure trade-off in ducts

    JP Raimondi +2 · “Cilia-driven transport in confined ducts: an active porous media model”

    2605.21567
  41. physics.flu-dyn arXiv submitted 2026-05-20
    One internal timer beats cast-and-surge in turbulent odor search

    Lorenzo Piro +6 · “Smart strategies to navigate turbulent odor plumes reorienting to local wind”

    2605.21329
  42. physics.flu-dyn arXiv submitted 2026-05-20
    Learned policy outperforms cast-and-surge in turbulent odor search

    Lorenzo Piro +6 · “Smart strategies to navigate turbulent odor plumes reorienting to local wind”

    2605.21329
  43. physics.bio-ph arXiv submitted 2026-05-20
    SERS nanopore plus CNN reads proline hydroxylation in single peptides

    Yingqi Zhao +8 · “Label-free SERS Discrimination of Native Proline Hydroxylation at Single-molecule peptide by Deep Learning-assisted plasmonic nanopore”

    2605.21084
  44. physics.app-ph arXiv submitted 2026-05-20
    Blueprint couples materials and biomedical data into governed AI workflows

    D.-M. Mei +53 · “AIMBio-Mat: An AI-Native FAIR Platform for Closed-Loop Materials Discovery and Biomedical Translation”

    2605.21083
  45. cond-mat.soft arXiv submitted 2026-05-20
    Confinement induces bistable tangential orientations in active particles

    Elsa Baby +2 · “Origin of Persistent Boundary Motion in Confined Active Matter”

    2605.20938
  46. physics.bio-ph arXiv submitted 2026-05-19
    Contractile pre-strains close large jellyfish wounds mechanically

    Anne Materne +3 · “Effective strains enable rapid wound closure in jellyfish after injury”

    2605.20463
  47. physics.bio-ph arXiv submitted 2026-05-19
    Xenon spin alters anesthesia through chiral permeability

    Allan Wang +1 · “Xenon Anesthesia and Nuclear Spin Effects in Chiral Systems”

    2605.19395
  48. physics.bio-ph arXiv submitted 2026-05-18
    Optimized double nanoholes triple field boost in optical tweezers

    Pau Molet +4 · “Morphology-Driven optimization of Double Nanohole-based Plasmonic Optical Tweezers”

    2605.20259
  49. cond-mat.soft arXiv submitted 2026-05-18
    Polymerization alone unifies all amoeboid migration modes

    Winfried Schmidt +2 · “Amoeboid cell migration and shape dynamics driven by actin polymerization”

    2605.18152
  50. q-bio.PE arXiv submitted 2026-05-17
    Communities exhibit skewed weak and Pareto strong interactions

    Takuya Hojo +2 · “Skewed weak and Pareto-tailed strong interactions accompany community diversity and complexity”

    2605.17220