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INDEX

Every paper Pith has read and judged, in one searchable index.

1,290 reviewed papers in physics.bio-ph · newest first · page 23

Pith rank means recent reader upvotes with each upvote's ranking weight halved after 24 hours. The archive itself is sorted by arXiv submission date.

  1. physics.bio-ph arXiv submitted 2024-12-19
    Tomato gland hairs burst in under 1 millisecond

    Jared Popowski +4 · “Glandular Trichome Rupture in Tomato Plants is an Ultra-Fast & Sensitive Defense Mechanism Against Insects”

    2412.14507
  2. physics.optics arXiv submitted 2024-12-18
    One shared path captures fluorescence and structure in live zebrafish

    Rui Ma +3 · “Combined selective plane illumination microscopy (SPIM) and full-field optical coherence tomography (FF-OCT) for in vivo imaging”

    2412.14047
  3. physics.bio-ph arXiv submitted 2024-12-18
    Protein conductivity may rank drug potency and viral spread

    Betony Adams +2 · “Fool's gold: ligand-receptor interactions and the origins of life”

    2412.13836
  4. q-bio.BM arXiv submitted 2024-12-18
    TCR distance metric predicts shared specificity on unseen targets

    Andrew G.T. Pyo +7 · “Data-driven Discovery of Biophysical T Cell Receptor Co-specificity Rules”

    2412.13722
  5. physics.optics arXiv submitted 2024-12-17
    Biphasic pulses make chemical lights bright enough to steer fly larvae

    Chang-Ki Moon +5 · “High-power pulsed electrochemiluminescence for optogenetic manipulation of Drosophila larval behaviour”

    2412.13052
  6. physics.bio-ph arXiv submitted 2024-12-17
    Tissue fatigue is reversible when repair beats the loading cycle

    Eleni Papafilippou +4 · “Interplay of damage and repair in the control of epithelial tissue integrity in response to cyclic loading”

    2412.13040
  7. physics.bio-ph arXiv submitted 2024-12-17
    A TCID50 reading hides how many infectious virions are in the sample

    Christian Quirouette +3 · “Does the random nature of cell-virus interactions during in vitro infections affect TCID$_{50}$ measurements and parameter estimation by mathematical models?”

    2412.12960
  8. physics.bio-ph arXiv submitted 2024-12-17
    Pea and soy capsules carry both cargo types and degrade in water

    Ngoc-Duy Dinh +4 · “Hierarchical Plant Protein Microcapsules for Hydrophilic and Hydrophobic Cargo Molecules”

    2501.01962
  9. q-bio.NC arXiv submitted 2024-12-16
    Missing eye asymmetry drives dyslexia's ghost letters

    Albert Le Floch +1 · “The lack of asymmetry of the Maxwell centroids, and of ocular dominance, in persons with dyslexia”

    2412.12053
  10. cond-mat.soft arXiv submitted 2024-12-16
    Bacteria swim opposite a polarized surface with 40% bias

    Mahesha Kodithuwakku Arachchige +5 · “Directional Swimming of B. Subtilis Bacteria Near a Switchable Polar Surface”

    2412.11877
  11. cond-mat.soft arXiv submitted 2024-12-16
    Even a few dissenters turn flocking reentrant

    Tian Tang +2 · “Reentrant phase behavior in binary topological flocks with nonreciprocal alignment”

    2412.11871
  12. q-bio.PE arXiv submitted 2024-12-14
    One equation predicts where new mutations survive

    Jason M. Gray +3 · “Asymmetric Interactions Shape Survival During Population Range Expansions”

    2412.10937
  13. physics.med-ph arXiv submitted 2024-12-12
    0.16 pg/mL: a paper strip assay beats benchtop troponin sensitivity

    Gyeo-Re Han +13 · “Deep learning-enhanced chemiluminescence vertical flow assay for high-sensitivity cardiac troponin I testing”

    2412.08945
  14. cond-mat.stat-mech arXiv submitted 2024-12-11
    Random grids fix a built-in bias in reaction-path search

    Tetsuro Nagai +1 · “Deterministic Path Search Algorithm on Free-Energy Landscape using Random Grids”

    2412.08267
  15. physics.bio-ph arXiv submitted 2024-12-10
    Neural network learns pupa rate from weather

    Branislava Lalic +5 · “Modelling Mosquito Population Dynamics using PINN-derived Empirical Parameters”

    2412.07514
  16. cond-mat.soft arXiv submitted 2024-12-10
    Bi-Mamba extracts diffusion parameters from single short tracks

    Maxime Lavaud (LOMA) +4 · “Bidirectional Mamba state-space model for anomalous diffusion”

    2412.07299
  17. physics.bio-ph arXiv submitted 2024-12-09
    THz light loosens cell membranes without heating them

    Hiromichi Hoshina · “Order-disorder phase transition of cell membrane induced by THz irradiation studied via fluorescence recovery after photobleaching”

    2412.06364
  18. physics.bio-ph arXiv submitted 2024-12-09
    Two levers control soy bioplastic stiffness

    Hanxun Jin +6 · “Domain Structure and Interface Control of Mechanical Stiffness in Sustainable Cellulose Bio-nanocomposites”

    2412.13210
  19. cond-mat.soft arXiv submitted 2024-12-08
    Stalled motor rows flip on flagellar beating past an ATP threshold

    Irene Anello +2 · “Beating of eukaryotic flagella via Hopf bifurcation of a system of stalled molecular motors”

    2412.06067
  20. physics.bio-ph arXiv submitted 2024-12-08
    Damped DNA solitons shrink but keep their speed

    O. Pav\'on-Torres +2 · “Quasi-stationary evolution of cubic-quintic NLSE drop-like solitons in DNA-protein systems”

    2412.06854
  21. cond-mat.soft arXiv submitted 2024-12-06
    Volvox ECM compartments follow gamma curves as they round out

    Benjamin von der Heyde +6 · “Spatiotemporal distribution of the glycoprotein pherophorin II reveals stochastic geometry of the growing ECM of $Volvox~carteri$”

    2412.05059
  22. physics.bio-ph arXiv submitted 2024-12-06
    Polymyxin B rides on lung surfactant's surface

    Nina Kr\'alovi\v{c}-Kanjakov\'a +8 · “Polymyxin B-Enriched Exogenous Lung Surfactant: Thermodynamics and Structure”

    2412.04894
  23. cs.LG arXiv submitted 2024-12-05
    Muscle force prediction works without force labels

    Shuhao Ma +5 · “Physics-informed Deep Learning for Muscle Force Prediction with Unlabeled sEMG Signals”

    2412.04213
  24. cond-mat.soft arXiv submitted 2024-12-05
    Exact macrostate populations come from microstate MSM projection

    Sofia Sartore +2 · “Markov-type state models to describe non-Markovian dynamics”

    2412.08660
  25. cond-mat.soft arXiv submitted 2024-12-05
    Cavity shape wobbles, not friction, separate rough surfaces

    Pierre Tapie +3 · “A Tactile Void”

    2412.04024
  26. physics.chem-ph arXiv submitted 2024-12-05
    Maximizing a spectral gap learns slow molecular variables

    Tu\u{g}\c{c}e G\"okdemir +1 · “A Note on Spectral Map”

    2412.04011
  27. physics.bio-ph arXiv submitted 2024-12-05
    Nonequilibrium flux drives pattern switching in dryland vegetation

    Jie Su +4 · “Revealing Physical Mechanisms of Pattern Formation and Switching in Ecosystems via Nonequilibrium Landscape and Flux”

    2412.03978
  28. physics.bio-ph arXiv submitted 2024-12-05
    EcoRI's electron currents co-resonate only with its DNA target

    E.Faraji +7 · “Electrodynamic forces driving DNA-protein interactions at large distances”

    2412.12127
  29. physics.med-ph arXiv submitted 2024-12-04
    Spray-on 2D film turns skin into a low-impedance electrode

    Dehui Zhang +16 · “Electrically functionalized body surface for deep-tissue bioelectrical recording”

    2412.03749
  30. physics.bio-ph arXiv submitted 2024-12-04
    Optimal snake slither is a sawtooth

    Yogesh Phalak +1 · “Optimal Snake Locomotion on Flat Surfaces: An Analytical Framework”

    2412.03725
  31. eess.IV arXiv submitted 2024-12-04
    Neural network predicts glioblastoma growth 150x faster from two MRIs

    D. Cerrone +9 · “Patient-specific prediction of glioblastoma growth via reduced order modeling and neural networks”

    2412.05330
  32. cond-mat.soft arXiv submitted 2024-12-03
    Pinning lipid area blocks LNP pH phase transition

    Marius F.W. Trollmann +2 · “Revisiting Lipid Nanoparticle Composition and Structure: A Critical Take on Simulation Approaches”

    2412.02731
  33. physics.bio-ph arXiv submitted 2024-12-03
    Social cues alter foraging groups in distinct

    Lisa Blum Moyse +1 · “Social patch foraging theory in an egalitarian group”

    2412.02381
  34. cond-mat.mtrl-sci arXiv submitted 2024-12-02
    Laser-heated carbon black delivers cargo into 45% of K562 cells

    Weilu Shen +5 · “Cargo Delivery to Cells Using Laser-Irradiated Carbon-Black-Loaded PDMS”

    2412.02032
  35. cs.LG arXiv submitted 2024-12-02
    Machine learning beats classic tools for anomalous diffusion

    Wenjie Cai +6 · “Machine Learning Analysis of Anomalous Diffusion”

    2412.01393
  36. physics.bio-ph arXiv submitted 2024-12-02
    Tumor clusters move, split and re-form as a steady state

    Pablo Gottheil +14 · “Self organisation of invasive breast cancer driven by the interplay of active and passive nematic dynamics”

    2412.01285
  37. physics.bio-ph arXiv submitted 2024-12-01
    Tumor spheroids never plateau without external force

    Nonthakorn Olaranont +3 · “Chemomechanical regulation of growing tissues from a thermodynamically-consistent framework and its application to tumor spheroid growth”

    2412.00916
  38. physics.optics arXiv submitted 2024-12-01
    Retinal-scan AR glasses shine brighter as pupils shrink

    Maximilian Rutz +3 · “Perceived brightness and resolution of holographic augmented reality retinal scan glasses”

    2412.00831
  39. physics.bio-ph arXiv submitted 2024-12-01
    Chemokine size is set by a physical cost tradeoff

    Arash Tirandaz +5 · “Messenger size optimality in cellular communications”

    2412.00771
  40. cond-mat.soft arXiv submitted 2024-11-30
    Microsecond simulations needed for skin permeation accuracy

    Rinto Thomas +3 · “Insights into Dermal Permeation of Skin Oil Oxidation Products from Enhanced Sampling Molecular Dynamics Simulation”

    2412.00436
  41. physics.bio-ph arXiv submitted 2024-11-29
    Golden eagles gain lift from violent turbulent gusts

    Dipendra Gupta +4 · “Intermittent turbulent gusts lift eagles”

    2412.00231
  42. cond-mat.soft arXiv submitted 2024-11-29
    Motile active matter matures

    Gerhard Gompper +31 · “The 2024 Motile Active Matter Roadmap”

    2411.19783
  43. q-bio.NC arXiv submitted 2024-11-29
    Inhibitory neuron mix controls phase lag between coupled brain areas

    Katiele V. P. Brito +3 · “The role of inhibitory neuronal variability in modulating phase diversity between coupled networks”

    2411.19664
  44. physics.med-ph arXiv submitted 2024-11-29
    Hydroxyapatite dip doubles stem-cell adhesion on 3D-printed implants

    Semen Goreninskii +8 · “Single-step method for the immobilization of hydroxyapatite on 3D-printed porous polyetherketoneketone implants”

    2501.08133
  45. physics.bio-ph arXiv submitted 2024-11-29
    Cancer cells are softer and less viscous than healthy cells

    Anja Madleine Markl +8 · “Heterogeneity of tumor biophysical properties and their potential role as prognostic markers”

    2411.19532
  46. physics.bio-ph arXiv submitted 2024-11-27
    Photosynthesis uses singlet fission to capture extra sunlight

    Shuangqing Wang +12 · “Singlet fission contributes to solar energy harvesting in photosynthesis”

    2411.18801
  47. physics.flu-dyn arXiv submitted 2024-11-27
    Sleeve gastrectomy speeds stomach emptying by 33 to 87 percent

    Weixuan Li +3 · “Modeling the Effect of Sleeve Gastrectomy on Gastric Digestion in the Stomach: Insights from Multiphase Flow Modeling”

    2411.18586
  48. physics.optics arXiv submitted 2024-11-27
    A million-sensor chip detects antibodies at sub-picomolar levels

    Sajjad AbdollahRamezani +14 · “High-throughput antibody screening with high-quality factor nanophotonics and bioprinting”

    2411.18557
  49. nlin.AO arXiv submitted 2024-11-27
    Explicit heat formula for individual noisy flagella trajectories

    Jing Qin +1 · “Synchronization of two bacterial flagella as a stochastic process”

    2411.18103
  50. cond-mat.soft arXiv submitted 2024-11-26
    Single swarmers stall when their liquid film vanishes

    Ajesh Jose +6 · “Immobility of isolated swarmer cells due to local liquid depletion”

    2411.17842