INDEX
Every paper Pith has read and judged, in one searchable index.
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physics.ins-det arXiv submitted 2019-08-27Diamond magnetometer tracks single beads as bonds break
Sean Lourette +4 · “Noncovalent force spectroscopy using wide-field optical and diamond-based magnetic imaging”
1908.10052 -
cond-mat.mes-hall arXiv submitted 2019-08-25DNA charge shifts are correlated
Tatiana Latychevskaia +4 · “Direct visualization of charge transport in suspended (or free-standing) DNA strands by low-energy electron microscopy”
1908.09374 -
math.AT arXiv submitted 2019-08-24Shape-based summaries decode swarm parameters at 99.9%
Dhananjay Bhaskar +6 · “Analyzing Collective Motion with Machine Learning and Topology”
1908.09081 -
physics.med-ph arXiv submitted 2019-08-23No evidence of critical slowing down before 105 seizures
Theresa Wilkat +2 · “No evidence for critical slowing down prior to human epileptic seizures”
1908.08973 -
physics.bio-ph arXiv submitted 2019-08-23Diffusion of integrins reports the force on an adhesion
Elizaveta A. Novikova +1 · “Evolving roles and dynamics for catch and slip bonds during adhesion cluster maturation”
1908.08934 -
physics.bio-ph arXiv submitted 2019-08-23Neural net reads cell-force wrinkles 4.9x better than FFT
Li Honghan +4 · “Image based cellular contractile force evaluation with small-world network inspired CNN: SW-UNet”
1908.08631 -
physics.bio-ph arXiv submitted 2019-08-22Flow shear cuts rod-bacteria encounters by aspect ratio squared
Jonasz S{\l}omka +4 · “Encounter rates between bacteria and small sinking particles”
1908.08376 -
q-bio.PE arXiv submitted 2019-08-21Fluid physics can override fitness in microbial evolution
Gurdip Uppal +1 · “Evolution of specialized microbial cooperation in dynamic fluids”
1908.07884 -
cond-mat.soft arXiv submitted 2019-08-21Immersed fiber networks gain a fluid-driven stiffness plateau
David Head +1 · “Non-affinity and fluid-coupled viscoelastic plateau for immersed fiber networks”
1908.07768 -
q-bio.SC arXiv submitted 2019-08-20Kinesin's ATP wait leaves a fingerprint in step randomness
Ryota Takaki +3 · “How kinesin waits for ATP affects the nucleotide and load dependence of the stepping kinetics”
1908.07570 -
physics.bio-ph arXiv submitted 2019-08-20Switching between states is driven by path entropy
Jacob Cook +1 · “Thermodynamics of switching in multistable non-equilibrium systems”
1908.07405 -
physics.bio-ph arXiv submitted 2019-08-20Most users redock drug molecules in VR within 2.15 Å
Helen M. Deeks +5 · “Interactive molecular dynamics in virtual reality for accurate flexible protein-ligand docking”
1908.07395 -
physics.bio-ph arXiv submitted 2019-08-20A step-shaped template puts the protein peak right on its edge
Manon C. Wigbers +3 · “Pattern localization to a domain edge”
1908.07309 -
q-bio.QM arXiv submitted 2019-08-19Binary gene networks flip abruptly at a critical field
Jeyashree Krishnan +3 · “A Modified Ising Model of Barab\'asi-Albert Network with Gene-type Spins”
1908.06872 -
cs.CG arXiv submitted 2019-08-19Mean curvature gradient completes solvation free energy derivatives
Arseniy Akopyan +1 · “The Weighted Mean Curvature Derivative of a Space-Filling Diagram”
1908.06779 -
cs.CG arXiv submitted 2019-08-19Explicit gradient formula completes solvation-force toolkit
Arseniy Akopyan +1 · “The Weighted Gaussian Curvature Derivative of a Space-Filling Diagram”
1908.06777 -
physics.bio-ph arXiv submitted 2019-08-19Task flips the brain's scale-free exponent in engaged cortex
Erik D. Fagerholm +6 · “Network constraints in scale free dynamical systems”
1908.06678 -
q-bio.SC arXiv submitted 2019-08-19Repair proteins that flee their own marks could find buried DNA
F. Cagnetta +2 · “A nonequilibrium strategy for fast target search on the genome”
1908.06671 -
physics.med-ph arXiv submitted 2019-08-18Criticality test catches every heart-attack ECG
Yiannis Contoyiannis +2 · “Applying the Method of Critical Fluctuations on Human Electrocardiograms”
1908.06408 -
cond-mat.stat-mech arXiv submitted 2019-08-17Fluctuations, not averages, carry the single-particle signal
Ralf Metzler · “Brownian motion and beyond: first-passage, power spectrum, non-Gaussianity, and anomalous diffusion”
1908.06233 -
cond-mat.soft arXiv submitted 2019-08-16Persistent motion alone steers particles toward open space
Koen Schakenraad +5 · “Topotaxis of active Brownian particles”
1908.06078 -
cond-mat.soft arXiv submitted 2019-08-1652 protein structures carry non-trivial θ-curves
Pawel Dabrowski-Tumanski +3 · “$\theta$-curves in proteins”
1908.05919 -
cond-mat.soft arXiv submitted 2019-08-16Fast and slow nucleosomes reveal a fluid mosaic in living chromatin
S. S. Ashwin +3 · “Organization of fast and slow chromatin revealed by single-nucleosome dynamics”
1908.05851 -
q-bio.MN arXiv submitted 2019-08-15Length-based quotients coarse-grain reaction networks
Dimitri Loutchko · “Algebraic Coarse-Graining of Biochemical Reaction Networks”
1908.05483 -
physics.bio-ph arXiv submitted 2019-08-14Life doesn't defy entropy—it feeds it
Kate Jeffery +2 · “On the statistical mechanics of life: Schr\"odinger revisited”
1908.08374 -
q-bio.MN arXiv submitted 2019-08-14A single global signal can decide when cells feed neighbors
David S. Tourigny · “Cooperative metabolic resource allocation in spatially-structured systems”
1908.05307 -
physics.bio-ph arXiv submitted 2019-08-14Bacterial photosynthesis stays efficient without quantum coherence
Susannah Bourne Worster +4 · “Structure and efficiency in bacterial photosynthetic light-harvesting”
1908.08373 -
physics.bio-ph arXiv submitted 2019-08-14Heart stretch itself can trigger spiral-wave arrhythmias
L. D. Weise +1 · “Cardiac Mechano-Electrical Dynamical Instability”
1908.05144 -
physics.bio-ph arXiv submitted 2019-08-14Water joins the oxygen-evolving complex only after an S2 isomer flip
Muhamed Amin +7 · “Thermodynamics of the S2-to-S3 State Transition of the Oxygen-Evolving Complex of Photosystem II”
1908.05056 -
physics.bio-ph arXiv submitted 2019-08-14Bacteria that speed up near food can split a migrating swarm in two
Theresa Jakuszeit +3 · “Migration and accumulation of bacteria with chemotaxis and chemokinesis”
1908.05050 -
cond-mat.soft arXiv submitted 2019-08-14Rolling membranes need anisotropic curvature
Hiroshi Noguchi · “Detachment of fluid membrane from substrate and vesiculation”
1908.04944 -
q-bio.MN arXiv submitted 2019-08-13All self-sustaining reaction networks reduce to one fixed point
Dimitri Loutchko · “Semigroup models for biochemical reaction networks”
1908.04642 -
q-bio.PE arXiv submitted 2019-08-13Clonal plant patterns reduce to one PDE with a gradient-squared term
Daniel Ruiz-Reyn\'es +3 · “A general model for vegetation patterns including rhizome growth”
1908.04603 -
physics.bio-ph arXiv submitted 2019-08-12Memory lets bacteria outrun gradient-sensing in rugged landscapes
Adam Gosztolai +1 · “Cellular memory enhances bacterial chemotactic navigation in rugged environments”
1908.04316 -
physics.bio-ph arXiv submitted 2019-08-10Cells stiffen when squeezed
M. C. Gandikota +6 · “Loops versus lines and the compression stiffening of cells”
1908.03725 -
physics.bio-ph arXiv submitted 2019-08-09Chlamydomonas beating flagella exert 23±5 pN
Thomas J. B\"oddeker +4 · “Dynamic Force Measurements on Swimming Chlamydomonas Cells using Micropipette Force Sensors”
1908.03602 -
physics.bio-ph arXiv submitted 2019-08-09Dimer that sometimes splits finds DNA target fastest
Jaeoh Shin +1 · “Target search on DNA by interacting molecules: First-passage approach”
1908.03597 -
cond-mat.stat-mech arXiv submitted 2019-08-09Extremes of biased random walks follow the Marchenko-Pastur law
Alexandre Guillet +2 · “Extreme-Value Statistics of Stochastic Transport Processes: Applications to Molecular Motors and Sports”
1908.03499 -
physics.bio-ph arXiv submitted 2019-08-09Rotating cells in a light trap makes 3D fluorescence images sharper
Gaszton Vizsnyiczai +6 · “Multiview microscopy of single cells through microstructure-based indirect optical manipulation”
1908.10746 -
q-bio.PE arXiv submitted 2019-08-09Patchy space can keep chaotic ecosystems alive far longer
Felix Roy +3 · “Can endogenous fluctuations persist in high-diversity ecosystems?”
1908.03348 -
physics.bio-ph arXiv submitted 2019-08-08Nerve firing heat is reversible membrane electric energy
Aymar C. L. de Lichtervelde +2 · “The Heat of Nervous Conduction: A Thermodynamic Framework”
1908.03223 -
q-bio.PE arXiv submitted 2019-08-07Weak disorder slows genetic loss
Youness Azimzade +2 · “Environmental Disorder Regulation of Invasion and Genetic Loss”
1908.02532 -
cond-mat.mes-hall arXiv submitted 2019-08-06Water states boost nanogap DNA signal by orders of magnitude
Ernane de Freitas Martins +4 · “Water-assisted electronic transport in graphene nanogaps for DNA sequencing”
1908.02258 -
physics.chem-ph arXiv submitted 2019-08-06Water's collective quantum forces stabilize folded proteins
Martin St\"ohr +1 · “Quantum Mechanics of Proteins in Explicit Water: The Role of Plasmon-Like Solute-Solvent Interactions”
1908.02181 -
physics.flu-dyn arXiv submitted 2019-08-05Capillary blood flow can yield a streaming voltage of ~0.1 V/mm
Rahul Roy +3 · “Streaming Potential in Bio-mimetic Microvessels Mediated by Capillary Glycocalyx”
1908.01492 -
physics.bio-ph arXiv submitted 2019-08-05Microalgae growth rate predicted by two flow numbers
C. Y. Ma · “On the theoretical prediction of microalgae growth for parallel flow”
1908.01472 -
physics.bio-ph arXiv submitted 2019-08-04Trained CNN separates stiff and soft DNA at 99.85%
Haiqian Yang +2 · “Identify the stiffness of DNA via deep learning”
1908.01268 -
physics.bio-ph arXiv submitted 2019-08-02A withheld particle set can spot overfitted cryo-EM maps
Sebastian Ortiz +5 · “Cross-validation tests for cryo-EM maps using an independent particle set”
1908.01054 -
q-bio.PE arXiv submitted 2019-08-02Short-lived immunity spaces out epidemics on its own
Gorm Gruner Jensen +3 · “Could short-lasting non-specific immunity explain seasonal spacing of epidemic diseases?”
1908.00925 -
physics.bio-ph arXiv submitted 2019-08-02For stiff membranes, more tension can ease protrusion formation
Raj Kumar Sadhu +1 · “Interplay between surface and bending energy helps membrane protrusion formation”
1908.00712