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INDEX

Every paper Pith has read and judged, in one searchable index.

1,290 reviewed papers in physics.bio-ph · newest first · page 19

Pith rank means recent reader upvotes with each upvote's ranking weight halved after 24 hours. The archive itself is sorted by arXiv submission date.

  1. physics.bio-ph arXiv submitted 2025-05-09
    C12 lipid tails make star-peptide antibiotics punch through membranes

    Amal Jayawardena +3 · “Lipidation-induced bacterial cell membrane translocation of star-peptides”

    2505.06447
  2. nlin.CD arXiv submitted 2025-05-09
    A single parameter stretches arrhythmia survival 1,000-fold

    Mahesh Kumar Mulimani +1 · “Spiral defect chaos with intermittency increases mean termination time”

    2505.06427
  3. q-bio.PE arXiv submitted 2025-05-09
    Antagonistic coinfection plus restricted mobility raises lifespan 54%

    J. Menezes +3 · “Antagonistic coinfection in rock-paper-scissors models during concurrent epidemics”

    2505.06377
  4. cond-mat.soft arXiv submitted 2025-05-09
    Tissue viscosity saturation needs active motility

    Rajsekhar Das +3 · “Controlling the morphologies and dynamics in three-dimensional tissues”

    2505.06168
  5. cond-mat.soft arXiv submitted 2025-05-09
    Droplet reactions peak when stay time equals meeting time

    Jacques Fries +4 · “Control of encounter kinetics by chemically active droplets”

    2505.06153
  6. physics.bio-ph arXiv submitted 2025-05-09
    Massive fish schools split, then pass turn info at 20x swim speed

    Haotian Hang +3 · “Self-reorganization and Information Transfer in Massive Schools of Fish”

    2505.05822
  7. cond-mat.soft arXiv submitted 2025-05-09
    Membrane thickness slows nanoscale ripples beyond 2D theory

    Zachary G. Lipel +2 · “Finite Membrane Thickness Influences Hydrodynamics on the Nanoscale”

    2505.05776
  8. physics.bio-ph arXiv submitted 2025-05-08
    Cell size spread, not shear, gates fly-wing crystallization

    Kartik Chhajed +5 · “Cell size heterogeneity controls crystallization of the developing fruit fly wing”

    2505.05437
  9. physics.bio-ph arXiv submitted 2025-05-08
    An optical-tweezer platform runs complex precision experiments unattended

    Martin Selin +12 · “SmartTrap: Automated Precision Experiments with Optical Tweezers”

    2505.05290
  10. cond-mat.soft arXiv submitted 2025-05-08
    One ratio predicts how polymers enter a gel

    Haruki Takarai +3 · “Partitioning Law of Polymer Chains into Flexible Polymer Networks”

    2505.05254
  11. physics.comp-ph arXiv submitted 2025-05-08
    Gradient ascent recovers 2 Å protein maps from 15-photon X-ray shots

    Steffen Schultze +2 · “Structure determination from single-molecule X-ray scattering images using stochastic gradient ascent”

    2505.05109
  12. cond-mat.soft arXiv submitted 2025-05-08
    Why DNA overtwists and RNA untwists when pulled

    Marco Zoli · “Statistical method for A-RNA and B-DNA”

    2505.05053
  13. physics.bio-ph arXiv submitted 2025-05-07
    Shear, not compression alone, drives fast clot debulking

    Yilong Changa +4 · “Clot Treatment via Compression- and Shear-Induced Densification of Fibrin Network Microstructure: A Combined in Vitro and In Silico Investigation”

    2505.04811
  14. physics.bio-ph arXiv submitted 2025-05-07
    Imaging shows sweat spreads as flat films

    Cibin T. Jose +6 · “A micro-to-macroscale and multi-method investigation of human sweating dynamics”

    2505.04789
  15. physics.bio-ph arXiv submitted 2025-05-06
    Distortion products let mosquitoes beat the sound-resolution limit

    Justin Faber +4 · “Antennal-Based Strategies for Sound Localization by Insects”

    2505.04020
  16. physics.med-ph arXiv submitted 2025-05-06
    Neural net recovers tissue stiffness and viscosity from shear waves

    Ziying Yin +6 · “Physics-informed Neural Networks Enable High Fidelity Shear Wave Viscoelastography across Multiple organs”

    2505.03935
  17. cond-mat.stat-mech arXiv submitted 2025-05-06
    Returning home can shrink or expand a species' minimum habitat

    Luiz Menon +2 · “Critical habitat size of organisms diffusing with stochastic resetting”

    2505.03727
  18. physics.bio-ph arXiv submitted 2025-05-04
    Liapunov exponent maps compare DNA and RNA stability

    Miguel Martin-Landrove +1 · “Liapunov exponent distributions and maps for multiple parameter logistic equation. Application to DNA and RNA sequences”

    2505.02276
  19. physics.bio-ph arXiv submitted 2025-05-04
    Early protein-RNA binding ran on magnesium bridges

    Michal H. Kol\'a\v{r} +1 · “Evolution of protein$-$RNA interactions”

    2505.02037
  20. cond-mat.soft arXiv submitted 2025-05-03
    Myosin flow imprints microwell shape on actin gels

    Archit Negi +3 · “Myosin-driven advection and actin reorganization control the geometry of confined actomyosin gel”

    2505.01717
  21. quant-ph arXiv submitted 2025-05-02
    Chirality boosts bird compass only via spin polarization

    Luke D. Smith +3 · “Chirality-bolstered quantum Zeno effect enhances radical pair-based magnetoreception”

    2505.01519
  22. physics.ed-ph arXiv submitted 2025-05-02
    Three hackathons made BARCODE

    Megan T. Valentine +1 · “Hacktive Matter: data-driven discovery through hackathon-based cross-disciplinary coding”

    2505.01365
  23. physics.bio-ph arXiv submitted 2025-05-02
    A1493 steadies codon-tRNA pairing by shrinking its open states

    Shuhao Zhang +3 · “Elucidating the role of ribosomal A1493 in stabilization and rigid support for the codon-anticodon helix from molecular dynamics simulations”

    2505.01327
  24. cond-mat.mtrl-sci arXiv submitted 2025-05-02
    Ice crystals turn hexagonal at -16 °C

    Jorge H. Melillo +1 · “Kinetic roughening transition of ice crystals and its implications during recrystallization”

    2505.01055
  25. q-bio.BM arXiv submitted 2025-05-01
    Evolution tunes protein frustration to power enzyme catalysis

    R. Gonzalo Parra +1 · “Frustration, dynamics and catalysis”

    2505.00600
  26. physics.med-ph arXiv submitted 2025-04-30
    Sclera stiffness rules optic nerve head strain

    Soumaya Ouhsousou +5 · “Evaluation of In Vivo Subject-Specific Mechanical Modeling of the Optic Nerve Head for Robust Assessment of Ocular Mechanics”

    2504.21765
  27. cond-mat.soft arXiv submitted 2025-04-30
    Two numbers now describe how soft shells deform under suction

    Kazutoshi Masuda +1 · “Analytical model and experimental validation for nonlinear mechanical response of aspirated elastic shells”

    2504.21283
  28. cond-mat.soft arXiv submitted 2025-04-29
    Porous drag hampers chemotactic clustering of swimmers

    Yasser Almoteri +1 · “Chemotactic aggregation dynamics of micro-swimmers in Brinkman flows”

    2504.20925
  29. cond-mat.soft arXiv submitted 2025-04-29
    Near a wall, E

    Pierre Martin +2 · “E. coli bacterium tumbling in bulk and close to surfaces: A simulation study”

    2504.20893
  30. physics.bio-ph arXiv submitted 2025-04-29
    Phosphate groups bond DNA to MoS2 at edges and defects

    Alexander Glamazda +9 · “Binding of native DNA to MoS$_{2}$ nanoflakes: the role of defects and edge atoms of MoS$_{2}$ nanostructures in their biofunctionalization”

    2504.20562
  31. q-bio.PE arXiv submitted 2025-04-29
    Simple identity synchronizes generational and physical time in populations

    Kaan \"Ocal +1 · “The two-clock problem in population dynamics”

    2504.20388
  32. cond-mat.soft arXiv submitted 2025-04-28
    Particle model predicts when gas vesicles buckle under ultrasound

    Nikolaos Ntarakas +4 · “Dissipative particle dynamics models of encapsulated microbubbles and gas vesicles for biomedical ultrasound simulations”

    2504.19890
  33. physics.bio-ph arXiv submitted 2025-04-28
    Omicron spike protein is measurably more open and hydrophilic

    Tiziana Mancini +7 · “Search for structural differences in spike glycoprotein variants of SARS-CoV-2: Infrared Spectroscopy, Circular Dichroism and Computational Analysis”

    2504.19766
  34. cond-mat.soft arXiv submitted 2025-04-28
    Compression alone can switch off coupled chemical oscillators

    Soumyadeep Mondal +3 · “Symmetry-protected phases in a 1D active solid with mechanochemical feedback”

    2504.19655
  35. cond-mat.soft arXiv submitted 2025-04-28
    Symmetry alone classifies phases in 1D active solids

    Soumyadeep Mondal +3 · “Symmetry-protected phases in a 1D active solid with mechanochemical feedback”

    2504.19655
  36. physics.flu-dyn arXiv submitted 2025-04-27
    Shear-thinning chyme boosts nutrient uptake in the gut

    Fabian Karl Henn +1 · “Viscosity's impact on nutrient uptake along the gut”

    2504.19235
  37. cond-mat.stat-mech arXiv submitted 2025-04-27
    Fluctuating diffusivity splits fractional Brownian motion models

    Wei Wang +2 · “Different behaviors of diffusing diffusivity dynamics based on three different definitions of fractional Brownian motion”

    2504.19190
  38. physics.bio-ph arXiv submitted 2025-04-26
    Living cytoplasm obeys a single power law from 0.1 to 100,000 Hz

    H. Ebata +6 · “Single power-law rheology of crowded cytoplasm in living cells”

    2504.18922
  39. physics.bio-ph arXiv submitted 2025-04-25
    Alligator bone survives 1,400 thermal cycles that degrade mammal bone

    Parker R. Brewster +3 · “Thermoregulation Variation in Vertebrates Reveals Differences in Thermal Fatigue Resistance of Bones”

    2504.18613
  40. cond-mat.stat-mech arXiv submitted 2025-04-24
    Lecithin nanolipids load more niclosamide at higher concentration

    Mtabazi G. Sahini +5 · “The need for statistical physics in Africa: perspective and an illustration in drug delivery problems”

    2504.17452
  41. physics.bio-ph arXiv submitted 2025-04-24
    Diamond microscope shows magnetite size switch inside single beads

    Mona Jani +8 · “Quantum diamond microscopy of individual vaterite microspheres containing magnetite nanoparticles”

    2504.17312
  42. physics.bio-ph arXiv submitted 2025-04-23
    Two local rules build fractal cell networks

    Subhashree Subhrasmita Khuntia +2 · “Self-organized fractal architectures driven by motility-dependent chemotactic feedback”

    2504.16539
  43. physics.bio-ph arXiv submitted 2025-04-22
    Simulations show urea dehydrates BSA

    Y. Ricardo Espinosa +2 · “Molecular Mechanisms Underlying the Effects of Urea and the Structural Dynamics of Bovine Serum Albumin”

    2504.16325
  44. cond-mat.soft arXiv submitted 2025-04-22
    Epithelial buckling force is set by length

    Urska Andrensek +1 · “Emergent epithelial elasticity governed by interfacial surface mechanics and substrate interaction”

    2504.15673
  45. cond-mat.soft arXiv submitted 2025-04-21
    Memory rewrites the equations of bacterial chemotaxis

    Manuel Mayo +1 · “Bacterial chemotaxis considering memory effects”

    2504.15405
  46. cond-mat.soft arXiv submitted 2025-04-21
    Bacteria remember: chemotaxis is nonlocal over 170 microns

    Manuel Mayo +1 · “Bacterial chemotaxis considering memory effects (letter)”

    2504.15385
  47. physics.bio-ph arXiv submitted 2025-04-21
    One EMG sensor drives a prosthetic hand at 92% accuracy

    Mustafa Can Kadilar +2 · “Impulsive pattern recognition of a myoelectric hand via Dynamic Time Warping”

    2504.15256
  48. physics.bio-ph arXiv submitted 2025-04-21
    Real brain networks sit near a critical point

    Luca Di Carlo +3 · “Extended mean-field theories for networks of real neurons”

    2504.15197
  49. cond-mat.soft arXiv submitted 2025-04-21
    Mechanosensitive proteins let spring networks learn strain responses

    Deb S. Banerjee +5 · “Learning via mechanosensitivity and activity in cytoskeletal networks”

    2504.15107
  50. physics.bio-ph arXiv submitted 2025-04-21
    Entropy production maximum drives life's evolution

    Yasuji Sawada +2 · “Maximum Entropy Production Principle of Thermodynamics for the Birth and Evolution of Life”

    2504.14923